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Linux Distros Unpatched Vulnerability : CVE-2026-31966

medium Nessus Plugin ID 302965

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Synopsis

The Linux/Unix host has one or more packages installed with a vulnerability that the vendor indicates will not be patched.

Description

The Linux/Unix host has one or more packages installed that are impacted by a vulnerability without a vendor supplied patch available.

 - HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. As one method of removing redundant data, CRAM uses reference-based compression so that instead of storing the full sequence for each alignment record it stores a location in an external reference sequence along with a list of differences to the reference at that location as a sequence of features. When decoding CRAM records, the reference data is stored in a char array, and parts matching the alignment record sequence are copied over as necessary. Due to insufficient validation of the feature data series, it was possible to make the `cram_decode_seq()` function copy data from either before the start, or after the end of the stored reference either into the buffer used to store the output sequence for the cram record, or into the buffer used to build the SAM `MD` tag. This allowed arbitrary data to be leaked to the calling function. This bug may allow information about program state to be leaked. It may also cause a program crash through an attempt to access invalid memory. Versions 1.23.1, 1.22.2 and 1.21.1 include fixes for this issue. There is no workaround for this issue. (CVE-2026-31966)

Note that Nessus relies on the presence of the package as reported by the vendor.

Solution

There is no known solution at this time.

See Also

https://security-tracker.debian.org/tracker/CVE-2026-31966

https://ubuntu.com/security/CVE-2026-31966

Plugin Details

Severity: Medium

ID: 302965

File Name: unpatched_CVE_2026_31966.nasl

Version: 1.3

Type: local

Agent: unix

Family: Misc.

Published: 3/18/2026

Updated: 3/20/2026

Supported Sensors: Frictionless Assessment AWS, Frictionless Assessment Azure, Frictionless Assessment Agent, Nessus Agent, Agentless Assessment, Nessus

Risk Information

VPR

Risk Factor: Medium

Score: 6.0

CVSS v2

Risk Factor: Medium

Base Score: 5

Temporal Score: 4.3

Vector: CVSS2#AV:N/AC:L/Au:N/C:P/I:N/A:N

CVSS Score Source: CVE-2026-31966

CVSS v3

Risk Factor: Critical

Base Score: 9.1

Temporal Score: 8.3

Vector: CVSS:3.0/AV:N/AC:L/PR:N/UI:N/S:U/C:H/I:N/A:H

Temporal Vector: CVSS:3.0/E:U/RL:U/RC:C

CVSS v4

Risk Factor: Medium

Base Score: 6.9

Threat Score: 2.7

Threat Vector: CVSS:4.0/E:U

Vector: CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:N/VC:L/VI:N/VA:L/SC:N/SI:N/SA:N

Vulnerability Information

CPE: cpe:/o:debian:debian_linux:14.0, cpe:/o:canonical:ubuntu_linux:16.04:-:lts, cpe:/o:canonical:ubuntu_linux:22.04:-:lts, cpe:/o:debian:debian_linux:11.0, cpe:/o:canonical:ubuntu_linux:24.04:-:lts, p-cpe:/a:canonical:ubuntu_linux:htslib, cpe:/o:canonical:ubuntu_linux:18.04:-:lts, cpe:/o:canonical:ubuntu_linux:25.10, p-cpe:/a:debian:debian_linux:htslib, cpe:/o:debian:debian_linux:13.0, cpe:/o:canonical:ubuntu_linux:14.04:-:lts, cpe:/o:canonical:ubuntu_linux:20.04:-:lts, cpe:/o:debian:debian_linux:12.0

Required KB Items: Host/local_checks_enabled, Host/cpu, global_settings/vendor_unpatched, Host/OS/identifier

Exploit Ease: No known exploits are available

Vulnerability Publication Date: 3/18/2026

Reference Information

CVE: CVE-2026-31966